• Blacque, O.E., Li, C., Inglis, P.N., Esmail, M.A., Ou, G., Mah, A.K., Baillie, D.L., Scholey, J.M., Leroux, M.R. (2006). The WD repeat-containing protein, IFTA-1, is required for retrograde intraflagellar transport. In press, Molecular Biology of the Cell.

• Hao, L., Mukherjee, K., Liegeois, S., Baillie, D.L., Labouesse, M., Burglin, T.R. (2006) The hedgehog-related gene qua-1 is required for molting in Caenorhabditis elegans. Developmental Dynamics 235:1469-1481.

• Gallo, M., Mah, A.K., Johnsen, R.C., Rose, A.M., Baillie, D.L. (2006) Caenorhabditis elegans dpy-14: an essential collagen gene with unique expression profile and physiological roles in early development. Molecular Genetics and Genomics 275:527-539.

• Polet, D., Lambrechts, A.., Ono, K., Mah, A., Peelman, F., Vandekerckhove, J., Baillie, D.L., Ampe, C., Ono, S. (2006) C. elegans expresses three functional profilins in a tissue specific manner.  Cell Motil. Cytoskeleton. 63(1):14-28.

• Zhao, Z., Fang, L., Chen, N., Johnsen, R.C., Stein, L., Baillie, D.L. (2005) Distinct regulatory elements mediate similar expression patterns in Caenorhabditis elegans’ excretory cell. Journal of Biological Chemistry 280(46): 38787-38794.

• Zhao, Y., Johnsen, R.C., Baillie, D.L., Rose, A.M. (2005) C. elegans in Space? A model biological dosimeter.  Gravitational and Space Biology Bulletin 18(2): 11-16.

• Blacque, O.E., Perens, E.A., Boroevich, K.A., Inglis, P.N., Li, C., Warner, A., Khattra, J., Holt, R.A., Ou, G., Mah, A.K., McKay, S.J., Huang, P., Swoboda, P., Jones, S.J.M., Marra, M.A., Baillie, D.L., Moerman, D.G., Shaham, S., Leroux, M.R. (2005) Functional genomics of the cilium, a sensory organelle. Current Biology 15(10): 935-941.

• Maciejowski, J., Ahn, J.H., Cipriani, P.G., Killian, D.J., Chaudhary, A.L., Lee, J.I., Voutev, R., Johnsen, R.C., Baillie, D.L., Gunsalus, K.C., Fitch, D.H., Hubbard, E.J. (2005) Autosomal genes of autosomal/X-linked duplicated gene pairs and germline proliferatin in C. elegans.  Genetics 169: 1997-2011.

• Chen, N., Pai, S.,  Zhao, Z., Mah, A., Newbury, R., Johnsen, R.C., Moerman, D.G., Baillie, D.L., Stein, L.D.  (2005) Identification of a novel nematode chemosensory gene family. PNAS 102(1): 146-151.

• Hsiang, T., Baillie, D.L. (2005) Comparison of the yeast proteome to other fungal genomes to find core fungal genes.  Journal of Molecular Evolution 60(4): 475-483.
•  Zhao, Z., Sheps, J.A., Ling, V., Fang, L.L., Baillie, D.L., (2004) Expression Analysis of ABC Transporters Reveals Differential Functions of Tandemly Duplicated Genes in Caenorhabditis elegans.  Journal of Molecular Biology, 344(2): 409 417.
•  Anyanful, A., Ono, K., Johnsen, R.C., Ly, H., Jensen, V., Baillie, D.L., Ono, S., (2004)  The RNA-binding protein SUP-12 controls muscle-specific splicing of the ADF/cofilin pre-mRNA in Caenorhabditis elegans.  Journal of Cell Biology 167(4): 639-647.
•  Zhao, Z., Fang, F.L., Johnsen, R.C., Baillie, D.L., (2004) ATP Binding Cassette Protein E (ABCE) is involved in gene transcription and translation in C. elegans. Biochemical and Biophysical Research Communications, 323(1): 104 - 111.
• Fan, Y., Esmail, M.A., Ansley, S.J., Blacque, O.E., Boroevich, K., Ross, A.J., Moore, S.J., Badano, J.L., May-Simera, H., Compton, D.S., Green, J.S., Lewis, R.A., van Haelst, M.M., Parfrey, P.S., Baillie, D.L., Beales, P.L., Katsanis, N., Davidson, W.S., Leroux, M.R., (2004).  Mutations in a member of the ras superfamily of small GTP-binding proteins causes Bardet-Biedl syndrome.  Nature Genetics, 36(9): 989 993.
• Anna Henricson, Erik L.L. Sonnhammer, David L. Baillie, and Ana Vaz Gomes (2004).  Functional Characterization in Caenorhabditis elegans of Transmembrane Worm-Human Orthologs  BMC Genomics 5(1): 85.
• Blacque O. E., M. J. Reardon, J. McCarthy, C. Li, M. R. Mahjoub, S. J. Ansley, J. L. Badano, A. K. Mah, P. L. Beales, W. S. Davidson, R. C. Johnsen, M. Audeh, R. H. A. Plasterk, D. L. Baillie, N. Katsanis, L. M. Quarmby, S. R. Wicks, and M.l R. Leroux  (2004)  Loss of C. elegans BBS-7 and BBS-8 protein function results in cilia defects and compromised intraflagellar transport of PSM-5/polaris and CHE-11.  Genes and Development 18(13): 1630-1642.
• Kao, G. Tuck, S., Baillie, D., Sundaram, M.V. 2004.  C. elegans SUR-6/PR55 cooperates with LET-92/protein phosphatase 2A and promotes Raf activity independently of inhibitory Akt phosphorylation sites.  Development Feb;131(4):755-65.
• Hsiang, T. and Baillie, D.L. 2004.  Recent progress, developments and issues in  comparative fungal genomics.  Can. J. Plant Pathol. 26:19-30.
• Sheps, Jonathan A., Steven Ralph, Zhongying Zhao, David L. Baillie and Victor Ling.  2004.  The ABC transporter gene family of Caenorhabditis elegans has implications for the evolutionary dynamics of multidrug resistance in eukaryotes.   Genome Biology, 5:R15.
• Wei HC, Sanny J, Shu H, Baillie DL, Brill JA, Price JV, Harden N The Sac1 lipid phosphatase regulates cell shape change and the JNK cascade during dorsal closure in Drosophila. Curr Biol. 2003 Oct 28;13(21):1882-7.
• Kuervers LM, Jones CL, O'Neil NJ, Baillie DL The sterol modifying enzyme LET-767 is essential for growth, reproduction and development in Caenorhabditis elegans. Mol Genet Genomics. 2003 Oct;270(2):121-31. Epub 2003 Aug 05.
• Severson AF, Baillie DL, Bowerman B.2002. A Formin Homology Protein and a Profilin Are Required for Cytokinesis and Arp2/3-Independent Assembly of Cortical Microfilaments in C. elegans. Curr Biol. 2002 Dec 23;12(24):2066-75.
• Furuta T, Baillie DL, Schumacher JM. 2002. Caenorhabditis elegans Aurora A kinase AIR-1 is required for postembryonic cell divisions and germline development. Genesis. 2002 Dec;34(4):244-50.
• Baillie DL.2002. Genomes in motion. Genome Res. 2002 Jun;12(6):843.
• McRory, John E., Celia M. Santi, Kevin S.C. Hamming, Janette Mezeyova, Kathy G. Sutton, David L. Baillie, Anthony Stea, and Terrance P. Snutch. 2001.  Molecular and Functional Characterization of a Family of Rat Brain T-Type Calcium Channels. Journal of Biological Chemistry. Feb 9:276(6):3999-4011.
• Grishok, Alla, Amy E. Pasquinelli, Darryl Conte, Na Li, Susan Parrish, Ilho Ha, David L. Baillie, Andrew Fire, Gary Ruvkun, and Craig C. Mello. 2001. Genes and Mechanisms Related to RNA Interference Regulate Expression of the Small Temporal RNAs that Control C. elegans  Developmental Timing. Cell, Vol. 106, 23-34.
• Jones SJ, Riddle DL, Pouzyrev AT, Velculescu VE, Hillier L, Eddy SR, Stricklin SL, Baillie DL, Waterston R, Marra MA. 2001.  Changes in gene expression associated with developmental arrest and longevity in Caenorhabditis elegans. Genome Res. 2001 Aug;11(8):1346-52.
• Hong, Leexan, Tricia Elbl, James Ward, Clara Franzinz-Armstrong, Krystyna K. Rybicka, Beth K. Gatewood, David Baillie and Elizabeth A. Bucher.  2001  MUP-4 is a novel receptor with functions in epithelial cell adhesion Caenorhabditis elegans. Journal of Cell Biology.  Jul 23:154(2):403-414.
• Legouis, Renaud, Satis Sookhareea, Julia Bosher, David Baillie and Michel Labouesse.  2000.  LET-413 is a basolateral protein required for assembly of adherens junctions in C. elegans.  Nature Cell Biology 2(7):415-422.
• Rouban, Regine, Greg Vatcher, David L. Baillie and Danielle Thierry-Mieg. 1999. A Fibroblast Growth Factor gene is encoded by C. elegans gene let-756. Accepted to Oncogene.
• Ono, Shoichiro, David L. Baillie, Guy M. Benian. 1999. UNC-60B, an ADF/Cofilin Family Protein, Is Required for Proper Assembly of Actin into Myofibrils in Caenorhabditis elegans Body Wall Muscle. J. Cell Biol. (145) 3: 491-502.
• Thacker, Colin, Marco A. Marra, Alana Jones, David L. Baillie and Ann M. Rose. 1999. Functional Genomics in C. elegans: An approach involving the comparisons of Sequences from Related Nematodes. Genome Research (9) 348-359.
• Vatcher, Greg, Marco A. Marra, David L. Baillie. 1999 Analysis of the Serine Hydroxylmethyltransferase gene using a comparison of the genomic sequence derived from C. elegans and C. briggsae. Gene 230: 137-144.
• Stewart, Helen I., Nigel J. O'Neil, Diana L. Janke, Norman W. Franz, Helen Chamberlin, Ann M. Howell, Erin J. Gilchrist, The Ha, Lynnette M. Kuervers, Greg Vatcher and David L. Baillie. 1998. Lethal mutations defining 112 complementation groups in a 4.5 megabase sequenced region of Caenorhabditis elegans chromosome III. Mol. Gen. Genetics, 260(3/2): 280-288.
• Vatcher, Greg P., Colin M. Thacker, Titus Kaletta, Heinke Schnabel, Ralf Schnabel, and David L. Baillie. 1998. Serine Hydroxymethyltransferase is Maternally Essential in Caenorhabditis elegans. J.B.C., 273(11): 6066-6073.
• Janke, Diana L., Jacqueline E. Schein, The Ha, Norman W. Franz, Nigel J. O'Neil, Greg P. Vatcher, Helen I. Stewart, Lynnette M. Kuervers, David Baillie, and Ann Rose. 1997. Interpreting a sequenced genome: toward a cosmic transgenic library of Caenorhabditis elegans. Genome Research 7(10): 974-985.
• Chamberlin, Helen, M., Robert E. Palmer, Anna P. Newman, Paul W. Sternberg, Daivd L. Baillie, and James H. Thomas. 1997. The PAX Gene egl-38 Mediates Developmental Patterning in Caenorhabditis elegans. Genes and Development, 124: 3919-3928.
• Zhen, Mei, Jacqueline E. Schein, David L. Baillie, and Peter M. Candido. 1996. An essential ubiquitin-conjugating enzyme with tissue and developmental specificity in the nematode Caenorhabditis elegans. Embo, 15(13): 3229-3237.
• Jones, Steven, and David L. Baillie. 1995. Characterization of the let-653 gene in Caenorhabditis elegans. Mol. Gen. Genet. 248(6): 719-726.
• Clark, D.V., D.S. Suleman, K.A. Beckenbach, E.J. Gilchrist and D.L. Baillie. 1995. Molecular cloning and characterization of the dpy-20 gene of Caenorhabditis elegans. Mol. Gen. Genet. 247: 367-378.

• Hsiang, T. and D.L. Baillie. 2006. Issues in comparative fungal genomics. Chapter 4 in: D.K. Arora, R. Berka and G.B. Singh (eds). Applied Mycology and Biotechnology,  Bioinformatics, Volume 6:100-122. Elsevier Science, Amsterdam. 350 pp.

• M.L. Edgley, D.L. Baillie, D.L. Riddle, and A.M. Rose (2006) Genetic balancers (April 6, 2006) Wormbook, ed. The C. elegans Research Community, WormBook, doi/10.1895/wormbook.1.89.1, http://www.wormbook.org.

• R.C. Johnsen1, D.L. Baillie1 and A. M. Rose2 (2004) A Biological Dosimeter for Assaying Genetic Damage due to Radiation Exposure in Space. International Astronautical Congress, Vancouver, Canada, October 2004.

• McKay S. J., R. Johnsen, J. Khattra, J. Asano, D.L. Baillie, S. Chan, N. Dube, L. Fang, B. Goszczynski, E. Ha, E. Halfnight, R. Hollebakken, P. Huang, K. Hung, V. Jensen, S.J.M. Jones, H. Kai, D. Li, A. Mah, M. Marra, J. McGhee, R. Newbury, A. Pouzyrev, D.L. Riddle, E. Sonnhammer, H. Tian, D. Tu, J.R. Tyson, G. Vatcher, A. Warner, K. Wong, Z. Zhao, and D.G. Moerman  (2003) Gene Expression Profiling of Cells, Tissues and Developmental Stages of the Nematode C. elegans.  Cold Spring Harbor Symposium LXVIII: The Genome of Homo Sapiens, Cold Spring Harbor Press, Cold Spring Harbor, New York.  Volume 68, pp. 159-170.

  Johnsen, Robert, and David L. Baillie.  1997.  Mutation, in C. elegans II Monograph 33, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, USA, Chapter 4, pp.79-95.

• Johnsen, R., and D. L. Baillie. 1997. Mutation, in C. elegans II monograph 33, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y., U.S.A., Chapter 4, pp. 79-95.
• Edgley, M., D. L. Baillie, D. L. Riddle, and A. M. Rose. 1995. Genetic balancers, in Methods in Cell Biology, Vol. 48, Chapter 7, pp. 212-263

Last Updated 09/25/2006