The change in shape of the anatomical structures within the brain is expected to have a profound effect on behavioral, learning and psychological outcomes. Brain development during early childhood from birth to adolescence is accompanied with increase in brain volume, neuronal growth in the cortex and shape formation of structures within the brain. In this work we aim to develop an automated method for analysis of brain MRI data and objective quantification of the change in shape within the brain with normal growth and the associated alterations due to diseased conditions.