Phylogenetic resources
Try the Web based Search Launcher: http://www.hgsc.bcm.tmc.edu/SearchLauncher/
Sequence Editors
Data analysis (preliminary
suggestions).
SeqApp- DNA alignment,
BLAST searches and more.
See Rod Page's overview
of sequence editors especially his SeAl.
For Windows, try GeneDoc.
Help with phylogenetic analysis (PHYLIP and PAUP)
Phylogenetic analysis using parsimony, distance (neighbor-joining), maximum
likelihood, and bootstrapping.
Starting PHYLIP
(formatting).
PHYLIP, General
Suggestions- running programs, etc.
PAUP file- from
SeqApp.
Example Nexus
/ PAUP file with comments and options.
Advanced Nexus/PAUP
file for PAUP* (PAUP4, PAUPstar).
Official PAUP homepage: http://paup.csit.fsu.edu/
Hennig86
help.
Information Sources
Check these sites for:
Entrez, Medline biological
literature database and DNA sequences
Doing Alignments
of molecular data and improved BLAST searchs
IUBIO archive (Indiana)
Taxonomy, Systematics
and phylogenetic software (Glasgow)
Generally useful Biology Page.
Biology
Directory.
Statistics (SFU)
Back
to the BioComputing Homepage
http://www.sfu.ca/~carmean/resources.html