arXiv author page | bioRxiv author page
Harnessing higher-dimensional fluctuations in an information engine
A Patrón Castro, J Bechhoefer, and DA Sivak
(2025)
arXiv
Global thermodynamic manifold for conservative control of stochastic systems
JR Sawchuk and DA Sivak
(2025)
arXiv
Information thermodynamics of cellular ion pumps
JD Jimenez-Paz, MP Leighton, and DA Sivak
(2025)
arXiv
How to quantify immigration from community abundance data using the Neutral Community Model
R Rafay, E Jones, DA Sivak, and SJ Fowler
(2025)
bioRxiv
Hunting for Maxwell's demon in the wild
J du Buisson, J Ehrich, MP Leighton, A Kundu, T Saha, J Bechhoefer, and DA Sivak
(2025)
arXiv
D-SPIN constructs gene regulatory network models from multiplexed scRNA-seq data revealing organizing principles of cellular perturbation response
J Jiang, S Chen, T Tsou, ..., DA Sivak, ZJ Gartner, and M Thomson
(2023)
bioRxiv
Active learning of spin network models
J Jiang, DA Sivak, and M Thomson
(2019)
arXiv
Physically optimizing inference
A Huang, B Sheldan, DA Sivak, and M Thomson
(2018)
arXiv
Model selection for biological crystallography
NS Babcock, DA Keedy, JS Fraser, and DA Sivak
(2018)
bioRxiv
Pre-stressing DNA augments and rescues Integration Host Factor binding affinity
M Siu, H Shroff, JJ Siegel, AL McEvoy, DA Sivak, AE Maris, AJ Spakowitz, and JT Liphardt
(2009)
arXiv